Anyone knows how to Import Magento XML file in navision 2016.

thanks in advance.

Hi Pravin,
Like any other XML file. Either by creating an XMLPort or a codeunit which reads it “manually”.

Or is there something special regarding a Magento XML file?

for magento xml structure follow magebase.com/…/
then create an according xmlport with same structure for import or work with cu 6224.